MapDeCoDe Helping you find the best tools for your NGS mapping tasks.
Hl3i
Description of the Hl3i dataset :
- Description : The dataset Hl3i is composed of 10 millions reads of length 103 bps. Hl3i is built from Hl0 by adding 3 bps to each read. Hl3i contains 112 reads with N
- Species : HG37.1
- Simulated using : wgsim v0.3.0
- Number of reads : 10000000
- Read length : 103
- Read pairing : Single End
- Minimum insert size :
- Maximum insert size :
- Maximum mismatches : 0
- Maximum number of indels : 1
- Maximum indel size : 3
- Maximum number of N per read : 10
Results visualisation
Mapped reads
Unique hits
Multiple hits
Rare hits
Results table
Name |
|
|||||
---|---|---|---|---|---|---|
GEM (v2) |
|
|
|
|
|
|
GASSST (v1.28) |
|
|
|
|
|
|
Bowtie2 (v2.0.6) |
|
|
|
|
|
|
Novoalign (v2.06.09) |
|
|
|
|
|
|
BWA (v0.5.8) |
|
|
|
|
|
|