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Hp1
Description of the Hp1 dataset :
- Description : The dataset Hp1 is composed of 5 millions paired of reads of length 100 bps. Hp1 does not contain any read with N. The quality file Hp1.fq associated to the read file Hp1.fa contains quality I for all reads and all positions.
- Species : HG37.1
- Simulated using : wgsim v0.3.0
- Number of reads : 5000000
- Read length : 100
- Read pairing : Paired End
- Minimum insert size : 250
- Maximum insert size : 750
- Maximum mismatches : 1
- Maximum number of indels : 0
- Maximum indel size : 0
- Maximum number of N per read : 0
Results visualisation
Mapped reads
Unique hits
Multiple hits
Rare hits
Results table
Name |
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Novoalign (v2.06.09) |
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BWA (v0.5.8) |
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Bowtie2 (v2.0.6) |
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Bowtie (v0.12.7) |
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GEM (v2) |
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SSAHA2 (v2.5.2) |
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SOAPaligner soap2 (v2.20) |
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